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NMR and EPR Technical Reports
NMR-002: Sample Devices and Magnetic
Susceptibility
Traditionally, NMR sample tubes have been made from commercial
glasses. For many years, WILMAD has used Corning 7740 Pyrex,
which has many important properties needed for NMR spectroscopy:
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rigidity (for precise structure) |
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excellent chemical resistivity |
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compatibility with valves, joints, vacuum lines, etc. |
Until recently, the magnetic properties of the glass sample
tube have not been a concern. Typical sample sizes were
3-5 times the height of the probe Rf coil. This kept all
distortions in the magnetic field, caused by magnetic susceptibility
discontinuities at the upper and lower ends of the sample,
far from the sensitive volume of the probe. Magnetic field
homogeneity at the sample could easily be controlled with
careful shimming.
As spectrometer field strength rose over the last 10 years,
smaller and smaller samples became accessible to NMR analysis.
Today, complex multi-dimensional spectra can routinely be
taken on samples as small as 10-20µg. Diluting samples
this tiny to nearly 1ml in volume results in concentrations
too low for adequate NMR spectra. Dissolving small samples
to volumes just equal to or even smaller than the Rf coil
results in poor resolution in today's high field spectrometers.
It's simply impossible to shim away the effects of magnetic
susceptibility discontinuities at the upper air/sample and
lower sample/tube interface so close to the Rf coil.
New Materials Deliver the Desired Properties
It's not surprising that new sample devices have been developed
to accommodate small samples in today's spectrometers. Now,
for the first time, the magnetic susceptibility of the sample
device is a critical factor . Specially formulated glasses,
carefully selected polymers, or high purity ceramic materials
are used in NMR sampling of small samples. By using materials
that match (within 5%) the magnetic susceptibility of the
microsample solvent, exceptional spectra can be obtained
on samples which would normally be too small for NMR. Confining
small samples between 'plugs' of materials with a magnetic
susceptibility that matches the solvent yields at least
three-fold sensitivity improvements over conventional sample
devices. Of course, the dimensions and solvent compatibility
of the plugs must be carefully selected.
Doty Scientific has developed a series of susceptibility
plugs or inserts, used with 3, 5, and 8mm NMR tubes, that
match the susceptibility of the most common and a few uncommon
NMR solvents. Compared to the glass alternative currently
available, Doty susceptibility plugs are easier to use and
usually less expensive. And because they're used with the
sample tubes you already have, you don't need an entirely
new set of NMR tubes.
Better Design Means Better Results Plugs
machined to fit the NMR tube snugly are difficult to use.
They can swell in certain solvents, trap air bubbles, and
break tubes. Doty plugs made from polymeric materials are
designed with a slightly 'loose' fit inside the tube. Doty's
Ceramic plugs, which don't swell, fit the tube a bit more
snugly. The loose fit allows you remove air bubbles more
easily. And the plugs can be removed after the spectra are
obtained and used with other samples while your sample remains
in the tube. A tiny amount of sample (1-2%) fills the space
between the tube and plugs. Filling factor loss is minimal.
Doty Susceptibility Plugs are provided in sets of two, an
upper and lower plug. The lower plug is shaped to fit the
round bottom of the NMR tube. The upper plug has a flat
bottom that defines the upper edge of the sample volume.
The upper face of both plugs has a thread1 that lets you
firmly attach a positioning rod. The upper plug is held
in the tube by the positioning rod. The rod, in turn, is
held by a collar, provided with each rod, that you rests
atop the tube.
Seal Samples in the Tube You can now obtain
a collar equipped with two O-Rings that lets you seal the
tube as well as holding the positioning rod at the right
height in the tube. This collar is ideal for long-term acquisitions,
where solvent evaporation is a concern. You can also store
samples in the tube between NMR studies, if you choose.
Selecting the Right Plug In addition to
the susceptibility match, it's important to appreciate the
solvent compatibility of the plug and rod. Kel-F rods provide
the widest variety of solvent resistance, so Kel-F rods
should be used if you plan to employ organic solvents. You'll
find solvent compatibilities and other physical properties
of Doty Susceptibility Plugs in Table 1, below. Choose Aurum
for compatibility with Chloroform-d, Water, Deuterium Oxide
and Water/Organic Solvent mixtures. Ultem is better if you
plan to use only Water or Deuterium Oxide, since Aurum can
swell in Water. Other properties of the plugs you'll need
to study before you select the plug best for your experiment
are Susceptibility and Interference Resonance for certain
nuclei that originate from the plugs. Table 2 shows these
properties. WILMAD's products listings provide solvent recommendations
for each plug material.
Since one length can't be used with all probes, Doty offers
two plug lengths for 5 and 8mm probes. Which plug length
will meet your need? That depends upon your sample volume
(height) and your probe. Check the position of the Rf coil
of your probe and the depth from the bottom of the coil
to the bottom of the probe head. Certain probes, e.g. certain
Varian and Bruker 5mm probes, have short probeheads. The
NMR tube might bottom out before a sample 12-15mm high is
centered in the Rf coil. Short plugs (8mm long) allow you
to center your sample properly in such probes. Unfortunately,
WILMAD and Doty have not compiled a compendium of probe
configurations for which short plugs are needed. You may
want to consult the operation manual for your probe or contact
your probe manufacturer for guidance.
The Positioning Rod It's important to store
positioning rods in a flat position. Otherwise, you may
find the rods develop a bend (or camber). It's difficult
to thread or 'capture' the lower plug with a bent positioning
rod. The threads at the end of the rod may not align with
the threads in the plug. Although the rods can be straightened,
you'll find properly handling the rods is easier. Use a
long (9 inch) WILMAD NMR tube box or the original packing
to store your positioning rods!
The Bottom Line If you select the wrong
plug, your results will suffer. So follow these steps in
selecting your plug.
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Select the tube size. |
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Determine the sample solvent. |
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If the solvent is viscous, decide if you will want
plugs |
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with vent grooves. |
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Compare the plug materials that match your solvent
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and select the one that's recommended for the nuclide
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you'll study. |
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Select the rod material |
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Order the plug sets you need. |
And if you need very high resolution spectra, you can also
use Doty Susceptibility Plugs to reduce the resolution loss
associated with thermal gradients.1
1 J. Lounila, et. al., J. Mag. Res. Ser. A, 118 (1996).
Table 1: NMR Solvent Compatibility Data
| Material |
Solvent Susceptibility*
(X 10-6) |
Viscosity
(cp, 20C) |
Density
(g/cm3) |
Plug for
1H-NMR |
Plug for
13C-NMR |
Plug for
19F-NMR |
| Acetone |
0.46 |
0.32 |
0.78 |
GFP**,
G-10 |
GFP**,
G-10 |
GFP**,
G-10 |
| Benzene |
0.61 |
0.65 |
0.61 |
Zirconia |
Zirconia |
Zirconia |
| Carbon Tetrachloride |
0.69 |
0..97 |
1.58 |
Zirconia |
Zirconia, Pyrex |
Zirconia |
| Chloroform |
0.74 |
0.58 |
1.48 |
Zirconia |
Zirconia, Pyrex |
Zirconia |
| Deuterium Oxide |
0.7 |
1 |
1.1 |
PEEK, Aurum, PPS |
PEEK, Aurum, Ultem |
PEEK, Aurum, Ultem, PPS |
| Dimethylsulfoxide |
0.68 |
N/A |
1.19 |
Zirconia, Aurum |
Zirconia, Aurum |
Zirconia, Aurum |
| Ethanol |
0.58 |
1.2 |
0.79 |
Zirconia, GFP** |
Zirconia, GFP** |
Zirconia, GFP** |
| Methanol |
0.53 |
0.6 |
0.79 |
Zirconia, GFP** |
Zirconia, G-10 |
Zirconia, GFP** |
| Toluene |
0.62 |
0.59 |
0.86 |
Zirconia |
Zirconia |
Zirconia |
| Water |
0.72 |
1 |
1 |
PEEK, Aurum, PPS |
PEEK, Aurum, Ultem |
PEEK, Aurum, Ultem, PPS |
* cgs units -
vc X 10-6
**GFP = Glass-filled PEEK
N/A = Not Available
Doty Susceptibility Plug Properties and Chemical Compatibilities
| Property |
Kel-F(for ref.) |
Pyrex (for ref.) |
PPS |
Aurum |
Ultem |
Zirconia |
GFP |
G-10 |
-
vc X 10-6 |
0.92 |
0.86 |
0.73 |
0.71 |
0.71 |
0.7 |
0.52 |
~0.5 |
| Wideline NMR Backgrounds |
F, Cl, C |
Si, B, Al, Na |
H, CS |
H, CN |
H, C, N |
Zr |
H, C, Al, Si, F |
H, C, Al |
| H2O absorp. % |
0.02 |
0.01 |
0.03 |
0.8 |
0.7 |
0.01 |
0.2 |
0.15 |
| Density (g/cm3) |
2.1 |
2.5 |
1.35 |
1.42 |
1.27 |
5.7 |
1.45 |
1.88 |
| Maximum Temperature (C) |
150 |
400 |
120 |
240 |
205 |
700 |
250 |
160 |
| Color |
Clear |
Glass |
Ivory |
Black |
Amber |
White |
Grey |
Green |
| Strong Acids |
E |
E |
G |
G |
G |
E |
P |
E |
| Strong Alkali |
E |
E |
E |
G |
G |
E |
G |
E |
| Alcohols and Aliphatics |
E |
E |
E |
E |
E |
E |
E |
E |
| Aromatic Hydrocarbons |
E |
E |
E |
E |
G |
E |
E |
E |
| Esters and Ketones |
E |
E |
E |
E |
E |
E |
E |
E |
| Organochlorides |
E |
E |
E |
G |
F |
E |
G |
G |
Chemical Resistance:
E = Excellent
G = Good, usually acceptable
F = Fair, sometimes acceptable
P = Poor
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